chr11:5248329:T>C Detail (hg19) (HBB, LOC106099062, LOC107133510)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr11:5,248,329-5,248,329 |
| hg38 | chr11:5,227,099-5,227,099 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | ||
| Ensemble | ENST00000647020.1:c.-78A>G |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
ClinVar
| Clinical Significance |
Pathogenic
Likely pathogenic
|
| Review star |  |
| Show details | |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
|
Pathogenic
|
1983-07-25 | no assertion criteria provided | Beta-plus-thalassemia |
germline
|
Detail |
|
Pathogenic
Likely pathogenic
|
2019-12-09 | criteria provided, multiple submitters, no conflicts | beta thalassemia |
germline
unknown
|
Detail |
|
Pathogenic
|
2024-01-16 | criteria provided, multiple submitters, no conflicts | not provided |
germline
|
Detail |
|
Pathogenic
|
criteria provided, single submitter | Hb SS disease |
germline
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.287 | alpha-Thalassemia | NA | CLINVAR | Detail | |
| 0.672 | beta thalassemia | NA | CLINVAR | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_000518.5(HBB):c.-78A>G AND Beta-plus-thalassemia | ClinVar | Detail |
| NM_000518.5(HBB):c.-78A>G AND beta Thalassemia | ClinVar | Detail |
| NM_000518.5(HBB):c.-78A>G AND not provided | ClinVar | Detail |
| NM_000518.5(HBB):c.-78A>G AND Hb SS disease | ClinVar | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs33931746 dbSNP
- Genome
- hg19
- Position
- chr11:5,248,329-5,248,329
- Variant Type
- snv
- Reference Allele
- T
- Alternative Allele
- C
Genome browser